| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7K1E8_MEDTR | 344 | 63.6 | 73.8 | (tr|G7K1E8) RNA-binding protein OS=Medicago truncatula GN=MTR_5g034430 PE=4 SV=1 |
| TAIR_pep | AT1G60200.1 | 175 | 36.6 | 54.3 | | Symbols: | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein | chr1:22200882-22205241 REVERSE LENGTH=899 |
| Medicago | Medtr5g034430.1 | 366 | 61.3 | 71.1 | | RNA recognition motif protein, putative | HC | chr5:14931357-14939285 | 20130731 |
| Soybean | Glyma01g03810.1 | 341 | 57.7 | 69.1 | |
| LJGI | gnl|LJGI|BW627085 | 813 | 100.0 | 100.0 |
| Lj2g3v1391610.1 | length: 660 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMSmart | SM00360 | RNA | 1.5e-05 | 208-280 |
| ProfileScan | PS50102 | RRM | 9.217 | 207-284 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 3.4e-07 | 202-284 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 456-530 556-606 |
| FPrintScan | PR01217 | PRICHEXTENSN | 4.1e-09 | 9-25 31-43 64-85 89-105 |
| HMMPanther | PTHR18806 | RBM25 | 8e-49 | 106-605 |
| HMMPanther | PTHR18806:SF4 | SUBFAMILY | 8e-49 | 106-605 |
| Seg | seg | seg | NA | 14-61 64-86 90-118 140-153 174-197 381-389 438-450 453-500 504-534 538-545 551-570 |
| superfamily | SSF54928 | RNA-binding | 1.2e-09 | 146-281 |
| superfamily | SSF81995 | beta-sandwich | 9.3e-06 | 86-659 |
Lj2g3v1391610.1 nucl 10, cyto 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1391610.1 |