Miyakogusa Predicted Gene
- Lj2g3v1389570.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LAT1_SOYBN |
238 |
86.2 |
95.4 |
(tr|K7LAT1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G48830.1 |
164 |
64.4 |
78.0 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19800269-19802625 REVERSE LENGTH=511 |
| Medicago |
Medtr7g058760.2 |
229 |
84.6 |
93.1 |
| DUF3685 family protein | HC | chr7:21175459-21166251 | 20130731 |
| Soybean |
Glyma08g47030.1 |
238 |
86.2 |
95.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1389570.1 |
length: 129 aa. |
| IPR022552 |
Uncharacterised protein family Ycf55 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF12452 |
DUF3685 |
6.6e-12 |
57-126 |
- Wolf-PSORT
Lj2g3v1389570.1 nucl 3.5, chlo 3, cysk_nucl 2.5, mito 2, golg 2, cyto 1, plas 1, vacu 1, cyto_mito 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1389570.1 |
|