Miyakogusa Predicted Gene

Lj2g3v1378900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J5B0_SOYBN 1499 84.6 88.3 (tr|I1J5B0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60070.1 1301 72.5 81.5 | Symbols: | Adaptor protein complex AP-1, gamma subunit | chr1:22142944-22149296 REVERSE LENGTH=862
Medicago Medtr5g034780.1 1494 84.4 86.8 | AP-1 complex subunit gamma-2 | HC | chr5:15085660-15099803 | 20130731
Soybean Glyma01g03890.1 1499 84.6 88.3  
LJGI gnl|LJGI|TC65554 1201 100.0 100.0 homologue to UniRef100_Q9ZUI6 Cluster: T2K10.12 protein; n=1; Arabidopsis thaliana|Rep: T2K10.12 protein - Arabidopsis thaliana (Mouse-ear cress), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1378900.1 length: 870 aa.
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
HMMPfam PF01602 Adaptin_N 3.9e-141 27-578
IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF02883 Alpha_adaptinC2 4.2e-32 756-867
HMMSmart SM00809 Adaptin 4.4e-44 749-867
IPR008153 Clathrin adaptor, gamma-adaptin, appendage
Gene3D G3DSA:2.60.40.1230 no description 1.5e-46 728-869
ProfileScan PS50180 GAE 49.686 752-867
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 4.2e-184 8-595
IPR013041 Coatomer/clathrin adaptor appendage, Ig-like subdomain
superfamily SSF49348 Clathrin 2.4e-41 726-870
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.6e-102 23-590
IPR017107 Adaptor protein complex AP-1, gamma subunit
Cellular Component GO:0005794 Golgi apparatus    
Molecular Function GO:0008565 protein transporter activity    
Biological Process GO:0015031 protein transport    
HMMPIR PIRSF037094 Adaptor 0 1-870
HMMPanther PTHR22780:SF5 ADAPTER-RELATED 0 1-870
no_ID  
HMMPanther PTHR22780 ADAPTIN, 0 1-870
Seg seg seg NA 249-260
624-660
689-697
710-725
Wolf-PSORT
Lj2g3v1378900.1	chlo 9.5, chlo_mito 6, nucl 2, mito 1.5, cyto_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1378900.1