Miyakogusa Predicted Gene

Lj2g3v1378880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J5B1_SOYBN 466 66.0 72.3 (tr|I1J5B1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G40250.1 296 48.8 61.2 | Symbols: | RING/U-box superfamily protein | chr5:16086056-16087186 FORWARD LENGTH=376
Medicago Medtr5g034790.1 431 62.2 68.3 | RING-H2 finger protein ATL47 | HC | chr5:15104324-15102955 | 20130731
Soybean Glyma02g03780.1 451 65.7 70.9  
LJGI gnl|LJGI|TC63161 1961 98.9 98.9 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1378880.1 length: 375 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 3.2e-15 146-189
HMMSmart SM00184 Ring 8.2e-07 147-188
ProfileScan PS50089 ZF_RING_2 12.120 147-189
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.6e-18 143-192
no_ID  
HMMPanther PTHR14155 RING 2.8e-66 21-216
HMMPanther PTHR14155:SF23 OS01G0736600 2.8e-66 21-216
Seg seg seg NA 22-41
58-76
84-95
214-224
superfamily SSF57850 RING/U-box 6.8e-22 120-195
Wolf-PSORT
Lj2g3v1378880.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1378880.1