Miyakogusa Predicted Gene

Lj2g3v1378840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JC08_SOYBN 700 91.9 97.2 (tr|I1JC08) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G26830.1 598 78.5 88.0 | Symbols: | Threonyl-tRNA synthetase | chr5:9437351-9441568 FORWARD LENGTH=709
Medicago Medtr5g034820.1 699 91.6 96.9 | threonyl-tRNA synthetase/threonine-tRNA ligase, putative | HC | chr5:15119715-15131595 | 20130731
Soybean Glyma02g03750.1 700 91.9 97.2  
LJGI gnl|LJGI|TC62528 2141 100.0 100.0 similar to UniRef100_A7Q980 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1378840.1 length: 359 aa.
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00587 tRNA-synt_2b 1.2e-43 2-156
IPR002320 Threonine-tRNA ligase, class IIa
Molecular Function GO:0004829 threonine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006435 threonyl-tRNA aminoacylation    
FPrintScan PR01047 TRNASYNTHTHR 1.5e-55 52-80
85-108
186-214
230-243
257-269
HMMTigr TIGR00418 thrS: 7e-148 2-353
IPR004154 Anticodon-binding
Gene3D G3DSA:3.40.50.800 no description 4e-36 254-357
HMMPfam PF03129 HGTP_anticodon 3.6e-20 264-352
superfamily SSF52954 Class 1.7e-28 256-355
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 24.497 1-257
no_ID  
Gene3D G3DSA:3.30.930.10 no description 4.3e-112 2-253
HMMPanther PTHR11451 TRNA 7.1e-228 1-358
HMMPanther PTHR11451:SF5 THREONYL-TRNA 7.1e-228 1-358
superfamily SSF55681 Class 1.6e-79 1-255
Wolf-PSORT
Lj2g3v1378840.1	cyto 6, pero 3, cyto_E.R. 3, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1378840.1