Miyakogusa Predicted Gene

Lj2g3v1371320.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K465_MEDTR 652 84.7 91.3 (tr|G7K465) Nucleotide-binding oligomerization domain-containing protein OS=Medicago truncatula GN=MTR_5g035590 PE=4 SV=1
TAIR_pep AT1G10510.1 584 73.4 87.4 | Symbols: emb2004 | RNI-like superfamily protein | chr1:3461771-3465590 FORWARD LENGTH=605
Medicago Medtr5g035590.1 652 84.7 91.3 | LRR ribonuclease inhibitor domain protein | HC | chr5:15490899-15482144 | 20130731
Soybean Glyma02g03410.1 642 86.1 90.8  
LJGI gnl|LJGI|TC66274 809 100.0 100.0 similar to UniRef100_A7Q2H3 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1371320.2 length: 380 aa.
IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype
method AccNumber shortName E-value location
HMMSmart SM00368 Leucine 0.03 1-27
28-55
56-83
84-111
112-139
141-168
169-196
197-224
225-252
253-280
281-308
310-337
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.7e-37 2-221
222-365
HMMPanther PTHR24106 FAMILY 4.9e-60 3-318
HMMPfam PF13516 LRR_6 0.0038 2-22
28-51
56-78
112-133
143-159
170-191
197-219
226-248
256-275
281-303
313-333
Seg seg seg NA 92-112
superfamily SSF52047 RNI-like 2e-85 3-369
Wolf-PSORT
Lj2g3v1371320.2	cyto 5, plas 3, cyto_nucl 3, chlo 2, cysk 2, nucl_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1371320.2