Miyakogusa Predicted Gene

Lj2g3v1365820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K1N0_SOYBN 1867 85.8 90.9 (tr|K7K1N0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G70070.1 1531 70.1 83.5 | Symbols: EMB25, PDE317, ISE2 | DEAD/DEAH box helicase, putative | chr1:26390016-26394148 REVERSE LENGTH=1171
Medicago Medtr5g036660.1 1847 86.0 90.8 | DEAD-box ATP-dependent RNA helicase ISE2 | HC | chr5:16017947-16009934 | 20130731
Soybean Glyma01g04480.1 928 81.7 88.0  
LJGI gnl|LJGI|GO040294 1263 99.8 99.8 similar to UniRef100_A7Q2K9 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1365820.1 length: 1177 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 9.8e-07 518-579
HMMSmart SM00490 helicase 1.1e-13 493-579
ProfileScan PS51194 HELICASE_CTER 10.668 426-625
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1e-22 162-317
IPR012961 DSH, C-terminal
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMPfam PF08148 DSHCT 9.9e-34 1006-1173
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.2e-32 155-346
ProfileScan PS51192 HELICASE_ATP_BIND_1 25.454 167-332
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.4e-46 167-604
no_ID  
Coil coil coiled-coil NA 669-694
704-732
908-943
955-976
Gene3D G3DSA:3.40.50.300 no description 8.1e-17 159-346
501-586
HMMPanther PTHR11752 HELICASE 7.9e-155 72-625
Seg seg seg NA 25-56
69-113
190-199
670-686
Wolf-PSORT
Lj2g3v1365820.1	chlo 12.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1365820.1