Miyakogusa Predicted Gene
- Lj2g3v1350530.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J5H8_SOYBN |
431 |
88.7 |
93.5 |
(tr|I1J5H8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G10410.1 |
392 |
77.9 |
90.5 |
| Symbols: | Protein of unknown function (DUF1336) | chr1:3416842-3419264 REVERSE LENGTH=485 |
| Medicago |
Medtr5g037270.1 |
428 |
87.0 |
93.5 |
| plant/F14N23-31 protein | HC | chr5:16296142-16300981 | 20130731 |
| Soybean |
Glyma01g04630.1 |
431 |
88.7 |
93.5 |
|
| LJGI |
gnl|LJGI|TC71345 |
1275 |
99.7 |
99.7 |
similar to UniRef100_A7PMI5 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1350530.1 |
length: 231 aa. |
| IPR009769 |
Domain of unknown function DUF1336 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07059 |
DUF1336 |
1.6e-70 |
5-231 |
| no_ID |
|
| HMMPanther |
PTHR31558 |
FAMILY |
2.9e-160 |
1-231 |
| HMMPanther |
PTHR31558:SF0 |
SUBFAMILY |
2.9e-160 |
1-231 |
- Wolf-PSORT
Lj2g3v1350530.1 cyto 6, pero 4, mito 2, extr 1, E.R. 1, chlo_mito 1, cyto_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1350530.1 |
|