Miyakogusa Predicted Gene

Lj2g3v1349460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K8A8_MEDTR 746 76.0 85.6 (tr|G7K8A8) Tetratricopeptide repeat protein OS=Medicago truncatula GN=MTR_5g037400 PE=4 SV=1
TAIR_pep AT1G27150.1 550 57.0 74.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9429177-9432068 FORWARD LENGTH=468
Medicago Medtr5g037400.1 746 76.0 85.6 | TPR-like protein | HC | chr5:16375919-16382128 | 20130731
Soybean Glyma02g02850.1 703 73.5 83.7  
LJGI gnl|LJGI|TC69029 1245 100.0 100.0 similar to UniRef100_A7Q2P2 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1349460.1 length: 473 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.4e-12 408-460
no_ID  
Coil coil coiled-coil NA 342-363
HMMPanther PTHR32526 FAMILY 1.7e-238 1-472
HMMPanther PTHR32526:SF2 SUBFAMILY 1.7e-238 1-472
Seg seg seg NA 224-232
354-366
superfamily SSF48452 TPR-like 6.6e-12 120-294
Wolf-PSORT
Lj2g3v1349460.1	cyto 6.5, chlo 4, cyto_E.R. 4, nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1349460.1