Miyakogusa Predicted Gene

Lj2g3v1338980.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7K9S6_MEDTR 656 68.8 75.4 (tr|G7K9S6) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g038440 PE=4 SV=1

TAIR_pep AT3G17900.1 437 49.5 63.6 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:6128983-6133069 FORWARD LENGTH=838

Medicago Medtr5g038440.3 714 67.4 73.5 | plant/MEB5-like protein | HC | chr5:16869295-16878456 | 20130731

Soybean Glyma08g40760.1 572 61.1 69.1

LJGI gnl|LJGI|FS340929 299 100.0 100.0 similar to UniRef100_A7QW01 Cluster: Chromosome chr2 scaffold_196, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_196, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1338980.2 length: 542 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 88-102
145-161

Wolf-PSORT

Lj2g3v1338980.2 chlo 6, nucl 5, plas 1, extr 1, E.R. 1, E.R._plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1338980.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7K9S6_MEDTR	656	68.8	75.4	(tr\|G7K9S6) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g038440 PE=4 SV=1
TAIR_pep	AT3G17900.1	437	49.5	63.6	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). \| chr3:6128983-6133069 FORWARD LENGTH=838
Medicago	Medtr5g038440.3	714	67.4	73.5	\| plant/MEB5-like protein \| HC \| chr5:16869295-16878456 \| 20130731
Soybean	Glyma08g40760.1	572	61.1	69.1
LJGI	gnl\|LJGI\|FS340929	299	100.0	100.0	similar to UniRef100_A7QW01 Cluster: Chromosome chr2 scaffold_196, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_196, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

no_ID
Lj2g3v1338980.2				length: 542 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	88-102 145-161