Miyakogusa Predicted Gene

Lj2g3v1338900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KXQ4_SOYBN 1300 68.7 77.9 (tr|I1KXQ4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G69830.1 1092 61.3 74.3 | Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 | chr1:26288518-26293003 REVERSE LENGTH=887
Medicago Medtr8g468990.1 1201 68.1 78.7 | alpha amylase domain protein | HC | chr8:25017934-25009440 | 20130731
Soybean Glyma08g40810.1 1295 72.4 81.8  
LJGI gnl|LJGI|BP042103 333 87.7 87.7 homologue to UniRef100_Q5BLY3 Cluster: Plastid alpha-amylase; n=1; Malus x domestica|Rep: Plastid alpha-amylase - Malus domestica (Apple) (Malus sylvestris), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1338900.1 length: 912 aa.
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMPfam PF00128 Alpha-amylase 3.9e-24 542-831
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMSmart SM00642 Alpha-amylase 2e-43 521-850
IPR012850 Alpha-amylase, C-terminal beta-sheet
Molecular Function GO:0004556 alpha-amylase activity    
Molecular Function GO:0005509 calcium ion binding    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF07821 Alpha-amyl_C2 1.3e-22 851-910
HMMSmart SM00810 Alpha-amylase 9.2e-29 851-911
IPR013780 Glycosyl hydrolase, family 13, all-beta
Gene3D G3DSA:2.60.40.1180 no description 7.5e-19 856-910
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 2.3e-65 524-855
IPR015902 Glycoside hydrolase, family 13
Molecular Function GO:0003824 catalytic activity    
HMMPanther PTHR10357 ALPHA-AMYLASE 4.4e-143 521-889
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 2.3e-71 520-852
no_ID  
HMMPanther PTHR10357:SF9 ALPHA-AMYLASE 4.4e-143 521-889
Seg seg seg NA 31-50
76-89
444-455
484-511
superfamily SSF51011 Glycosyl 6.7e-21 855-911
Wolf-PSORT
Lj2g3v1338900.1	chlo 4, nucl 4, cyto 3, cysk 1.5, cysk_plas 1.5, cyto_E.R. 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1338900.1