Miyakogusa Predicted Gene

Lj2g3v1327450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SIZ2_LOTJA 474 95.1 95.5 (tr|I3SIZ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G69780.1 313 60.8 67.6 | Symbols: ATHB13 | Homeobox-leucine zipper protein family | chr1:26259166-26260465 FORWARD LENGTH=294
Medicago Medtr5g039000.1 461 81.1 85.4 | homeobox leucine zipper ATHB-like protein | HC | chr5:17182895-17180360 | 20130731
Soybean Glyma02g02290.3 446 79.6 82.7  
LJGI gnl|LJGI|TC74784 1449 100.0 100.0 homologue to UniRef100_A7QEH5 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1327450.1 length: 280 aa.
IPR000047 Helix-turn-helix motif
method AccNumber shortName E-value location
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding    
FPrintScan PR00031 HTHREPRESSR 1.1e-05 100-109
109-125
IPR001356 Homeodomain
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.1e-15 74-127
HMMSmart SM00389 Homeodomain 1.8e-18 72-133
ProfileScan PS50071 HOMEOBOX_2 17.394 69-129
IPR003106 Leucine zipper, homeobox-associated
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02183 HALZ 1.6e-18 129-172
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.2e-18 76-136
superfamily SSF46689 Homeodomain-like 2.9e-19 45-132
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 104-127
no_ID  
Coil coil coiled-coil NA 121-170
HMMPanther PTHR24326 FAMILY 3.5e-97 37-206
HMMPanther PTHR24326:SF74 SUBFAMILY 3.5e-97 37-206
Seg seg seg NA 13-23
184-193
Wolf-PSORT
Lj2g3v1327450.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1327450.1