Miyakogusa Predicted Gene
- Lj2g3v1278970.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KDY3_MEDTR |
323 |
92.1 |
96.3 |
(tr|G7KDY3) NAC domain protein OS=Medicago truncatula GN=MTR_5g040420 PE=4 SV=1 |
| TAIR_pep |
AT1G26870.1 |
271 |
87.1 |
93.6 |
| Symbols: FEZ, ANAC009 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:9312856-9314983 FORWARD LENGTH=425 |
| Medicago |
Medtr5g040420.1 |
323 |
92.1 |
96.3 |
| NAC domain class transcription factor | HC | chr5:17777239-17779842 | 20130731 |
| Soybean |
Glyma01g05680.1 |
323 |
93.3 |
97.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1278970.1 |
length: 165 aa. |
| IPR003441 |
No apical meristem (NAM) protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02365 |
NAM |
1e-52 |
15-142 |
| ProfileScan |
PS51005 |
NAC |
52.923 |
15-165 |
| superfamily |
SSF101941 |
NAC |
5.4e-52 |
15-162 |
| no_ID |
|
| HMMPanther |
PTHR31555 |
FAMILY |
1.9e-105 |
2-162 |
- Wolf-PSORT
Lj2g3v1278970.1 nucl 6, cyto 4, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1278970.1 |
|