Miyakogusa Predicted Gene
- Lj2g3v1277800.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SNB3_LOTJA |
466 |
100.0 |
100.0 |
(tr|I3SNB3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G14220.1 |
333 |
67.1 |
81.8 |
| Symbols: | Ribonuclease T2 family protein | chr1:4858642-4859601 REVERSE LENGTH=228 |
| Medicago |
Medtr5g041010.1 |
410 |
85.9 |
92.5 |
| ribonuclease T2 family protein | HC | chr5:18028304-18030068 | 20130731 |
| Soybean |
Glyma01g05850.1 |
398 |
82.7 |
90.7 |
|
| LJGI |
gnl|LJGI|TC79522 |
1156 |
99.7 |
99.7 |
similar to UniRef100_Q9FQL6 Cluster: S-like ribonuclease; n=1; Prunus dulcis|Rep: S-like ribonuclease - Prunus dulcis (Almond) (Prunus amygdalus), partial (74%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1277800.1 |
length: 226 aa. |
| IPR001568 |
Ribonuclease T2-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003723 |
RNA binding |
|
|
| Molecular Function |
GO:0033897 |
ribonuclease T2 activity |
|
|
| Gene3D |
G3DSA:3.90.730.10 |
no description |
2.5e-72 |
21-225 |
| HMMPanther |
PTHR11240 |
RIBONUCLEASE |
3.1e-75 |
5-226 |
| HMMPfam |
PF00445 |
Ribonuclease_T2 |
1.5e-60 |
26-210 |
| superfamily |
SSF55895 |
Ribonuclease |
4.5e-75 |
19-226 |
| IPR018188 |
Ribonuclease T2, active site |
| Molecular Function |
GO:0003723 |
RNA binding |
|
|
| Molecular Function |
GO:0033897 |
ribonuclease T2 activity |
|
|
| PatternScan |
PS00530 |
RNASE_T2_1 |
NA |
58-65 |
| PatternScan |
PS00531 |
RNASE_T2_2 |
NA |
111-122 |
- Wolf-PSORT
Lj2g3v1277800.1 chlo 5, nucl 4, extr 3, plas 1, golg 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1277800.1 |
|