Miyakogusa Predicted Gene
- Lj2g3v1277780.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KFC0_MEDTR |
1149 |
85.1 |
91.4 |
(tr|G7KFC0) Beta-1,3-galactosyltransferase OS=Medicago truncatula GN=MTR_5g041210 PE=4 SV=1 |
| TAIR_pep |
AT1G26810.1 |
815 |
61.2 |
76.2 |
| Symbols: GALT1 | galactosyltransferase1 | chr1:9286862-9289327 REVERSE LENGTH=643 |
| Medicago |
Medtr5g041210.1 |
1149 |
85.1 |
91.4 |
| beta-1,3-galactosyltransferase-like protein | HC | chr5:18095344-18101827 | 20130731 |
| Soybean |
Glyma02g12030.1 |
1132 |
84.5 |
91.4 |
|
| LJGI |
gnl|LJGI|TC78419 |
1733 |
99.8 |
99.8 |
similar to UniRef100_A7QEC3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1277780.2 |
length: 649 aa. |
| IPR001079 |
Galectin, carbohydrate recognition domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0030246 |
carbohydrate binding |
|
|
| HMMPfam |
PF00337 |
Gal-bind_lectin |
8.3e-37 |
176-367 |
| HMMSmart |
SM00276 |
Galectin |
0.0078 |
176-369 |
| HMMSmart |
SM00908 |
Galactoside-binding |
8.2e-27 |
180-368 |
| ProfileScan |
PS51304 |
GALECTIN |
38.279 |
176-369 |
| IPR002659 |
Glycosyl transferase, family 31 |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[213-649] |
3.7e-215 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
2.8e-40 |
411-595 |
| IPR008985 |
Concanavalin A-like lectin/glucanases superfamily |
| superfamily |
SSF49899 |
Concanavalin |
4.9e-26 |
172-371 |
| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
| Gene3D |
G3DSA:2.60.120.200 |
no description |
7e-26 |
309-366 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF11 |
BETA |
3.7e-215 |
213-649 |
| Seg |
seg |
seg |
NA |
122-132 |
- Wolf-PSORT
Lj2g3v1277780.2 cyto 6, mito 2, plas 2, mito_plas 2, chlo 1, nucl 1, vacu 1, pero 1, cyto_mito 1, golg_plas 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1277780.2 |
|