Miyakogusa Predicted Gene

Lj2g3v1277490.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J5U5_SOYBN 334 76.1 80.6 (tr|I1J5U5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G26670.1 267 60.4 74.3 | Symbols: VTI12, ATVTI12, VTI1B | Vesicle transport v-SNARE family protein | chr1:9216103-9217793 FORWARD LENGTH=222
Medicago Medtr5g042530.1 323 74.3 78.8 | vesicle transport V-SNARE protein amine-terminal protein | HC | chr5:18692488-18686987 | 20130731
Soybean Glyma01g06320.1 334 76.1 80.6  
LJGI gnl|LJGI|TC69725 1324 99.9 99.9 similar to UniRef100_A7PDI5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1277490.2 length: 222 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00397 Helical 0.0083 123-190
IPR007705 Vesicle transport v-SNARE, N-terminal
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
HMMPfam PF05008 V-SNARE 8e-24 12-91
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 8.8e-26 6-95
no_ID  
Coil coil coiled-coil NA 68-89
Gene3D G3DSA:1.20.5.110 no description 2.1e-20 129-192
Gene3D G3DSA:1.20.58.400 no description 7.1e-31 1-98
HMMPanther PTHR21230 VESICLE 1.7e-115 3-220
HMMPanther PTHR21230:SF14 SNARE 1.7e-115 3-220
HMMPfam PF12352 V-SNARE_C 6.3e-20 129-193
Seg seg seg NA 135-151
200-216
Wolf-PSORT
Lj2g3v1277490.2	golg 5, nucl 4, chlo 1, cyto 1, mito 1, plas 1, E.R. 1, chlo_mito 1, E.R._plas 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1277490.2 Not targeted -107.256 -69.732 -5.545 99.99% -31.979