Miyakogusa Predicted Gene

Lj2g3v1266100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JEC3_SOYBN 900 81.7 91.3 (tr|I1JEC3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G66520.1 372 38.4 56.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:26551879-26553741 FORWARD LENGTH=620
Medicago Medtr5g043780.1 859 78.5 88.7 | PPR containing plant-like protein | HC | chr5:19239453-19241320 | 20130731
Soybean Glyma02g12770.1 900 81.7 91.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1266100.1 length: 517 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.63 144-166
172-196
205-229
276-302
376-400
HMMPfam PF13041 PPR_2 3.1e-12 68-116
302-348
HMMTigr TIGR00756 PPR: 2.5e-08 72-104
172-196
205-237
276-304
304-337
ProfileScan PS51375 PPR 5.163 69-103
170-200
139-169
201-235
302-336
271-301
236-270
337-367
373-407
442-476
409-439
no_ID  
HMMPanther PTHR24015 FAMILY 3.4e-185 8-517
HMMPanther PTHR24015:SF136SUBFAMILY NOT 3.4e-185 8-517
Wolf-PSORT
Lj2g3v1266100.1	chlo 7, mito 2, nucl 1, cyto 1, plas 1, vacu 1, E.R. 1, cyto_nucl 1, cyto_mito 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1266100.1