Miyakogusa Predicted Gene

Lj2g3v1253990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5R3_LOTJA 706 95.3 95.3 (tr|I3S5R3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G26520.1 511 70.0 80.4 | Symbols: | Cobalamin biosynthesis CobW-like protein | chr1:9163448-9165594 REVERSE LENGTH=374
Medicago Medtr5g044050.1 635 85.2 90.7 | cobalamin biosynthesis protein | HC | chr5:19367945-19374070 | 20130731
Soybean Glyma01g07010.1 609 84.7 89.6  
LJGI gnl|LJGI|TC63091 2163 99.9 99.9 similar to UniRef100_A7P2I5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1253990.1 length: 364 aa.
IPR003495 CobW/HypB/UreG domain
method AccNumber shortName E-value location
HMMPfam PF02492 cobW 1e-51 30-220
IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
Gene3D G3DSA:3.30.1220.10 no description 9.2e-28 257-362
HMMPfam PF07683 CobW_C 4.4e-17 267-362
HMMSmart SM00833 Cobalamin 0.00014 266-362
superfamily SSF90002 Hypothetical 1.1e-22 266-363
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-34 26-260
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.6e-71 27-239
HMMPanther PTHR13748 COBW-RELATED 1.8e-150 1-363
HMMPanther PTHR13748:SF17 COBW 1.8e-150 1-363
Seg seg seg NA 246-261
Wolf-PSORT
Lj2g3v1253990.1	cyto 9, extr 2, nucl 1, vacu 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1253990.1