Miyakogusa Predicted Gene

Lj2g3v1252790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K7T2_SOYBN 882 71.6 81.7 (tr|K7K7T2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G26460.1 735 58.2 73.8 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9151816-9154407 FORWARD LENGTH=630
Medicago Medtr5g044270.1 875 68.8 81.9 | PPR containing plant protein | HC | chr5:19461566-19454595 | 20130731
Soybean Glyma01g07090.1 880 71.2 81.4  
LJGI gnl|LJGI|TC61355 1029 98.9 98.9 similar to UniRef100_A7PB53 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1252790.1 length: 609 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.12 176-204
HMMPfam PF13041 PPR_2 2.3e-09 485-531
HMMTigr TIGR00756 PPR: 0.00014 488-522
524-556
ProfileScan PS51375 PPR 9.799 173-207
137-172
210-244
486-520
450-485
521-555
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00065 366-544
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-37 107-580
HMMPanther PTHR24015:SF0 SUBFAMILY 1.3e-37 107-580
Seg seg seg NA 32-57
67-82
Wolf-PSORT
Lj2g3v1252790.1	chlo 8, mito 2.5, cysk 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1252790.1