Miyakogusa Predicted Gene

Lj2g3v1252590.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JZ42_MEDTR 769 83.6 89.8 (tr|G7JZ42) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g045620 PE=4 SV=1
TAIR_pep AT1G69290.1 657 70.6 84.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:26047372-26049348 REVERSE LENGTH=658
Medicago Medtr5g045620.1 769 83.6 89.8 | PPR containing plant-like protein | HC | chr5:20016549-20013908 | 20130731
Soybean Glyma02g13020.1 736 82.2 89.9  
LJGI gnl|LJGI|FS349031 1166 100.0 100.0 similar to UniRef100_A7P2F5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1252590.3 length: 447 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.075 77-96
159-183
HMMPfam PF13041 PPR_2 2.9e-11 297-340
HMMPfam PF13812 PPR_3 0.00016 223-254
HMMTigr TIGR00756 PPR: 3e-07 297-328
ProfileScan PS51375 PPR 5.722 4-39
75-110
152-186
222-256
187-221
293-327
328-358
370-404
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-57 1-409
HMMPanther PTHR24015:SF0 SUBFAMILY 1.6e-57 1-409
Wolf-PSORT
Lj2g3v1252590.3	cyto 9, chlo 2, nucl 1, cysk 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1252590.3