Miyakogusa Predicted Gene

Lj2g3v1252580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XK61_PRUPE 1003 73.6 84.3 (tr|M5XK61) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002589mg PE=4 SV=1
TAIR_pep AT1G69290.1 852 63.5 78.8 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:26047372-26049348 REVERSE LENGTH=658
Medicago Medtr5g044930.1 1001 76.1 84.6 | PPR containing plant-like protein | HC | chr5:19700063-19702654 | 20130731
Soybean Glyma02g13020.1 917 72.4 81.0  
LJGI gnl|LJGI|FS322440 1312 100.0 100.0 weakly similar to UniRef100_A7P2F5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1252580.1 length: 658 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.12 288-307
370-394
HMMPfam PF13041 PPR_2 4.9e-11 508-551
HMMPfam PF13812 PPR_3 0.00026 434-465
HMMTigr TIGR00756 PPR: 4.8e-07 508-539
ProfileScan PS51375 PPR 5.722 215-250
286-321
363-397
433-467
398-432
504-538
539-569
581-615
no_ID  
HMMPanther PTHR24015 FAMILY 4e-70 48-620
HMMPanther PTHR24015:SF0 SUBFAMILY 4e-70 48-620
Seg seg seg NA 48-61
Wolf-PSORT
Lj2g3v1252580.1	chlo 8, mito 4, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1252580.1