Miyakogusa Predicted Gene

Lj2g3v1238830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7K7W3_SOYBN 1678 73.9 81.8 (tr|K7K7W3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G38440.1 931 45.9 63.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr4:17989115-17994549 FORWARD LENGTH=1465
Medicago Medtr5g046240.1 1627 72.4 80.6 | RPAP1-like, carboxy-terminal protein | HC | chr5:20281096-20271961 | 20130731
Soybean Glyma02g13360.1 1678 73.9 81.8  
LJGI gnl|LJGI|TC71321 1445 99.7 99.7 weakly similar to UniRef100_A7P8I4 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1238830.1 length: 1109 aa.
IPR011989 Armadillo-like helical
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.10.10 no description 2e-06 136-244
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2e-06 135-239
no_ID  
HMMPanther PTHR21483 FAMILY 0 9-1102
HMMPanther PTHR21483:SF11 SUBFAMILY 0 9-1102
Seg seg seg NA 574-595
712-730
1029-1041
Wolf-PSORT
Lj2g3v1238830.1	chlo 4, nucl 3, E.R. 2, cyto_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1238830.1