Miyakogusa Predicted Gene

Lj2g3v1228820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K7W3_SOYBN 370 54.2 63.0 (tr|K7K7W3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G38440.1 98.6 29.2 44.4 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr4:17989115-17994549 FORWARD LENGTH=1465
Medicago Medtr5g046240.1 199 43.8 53.9 | RPAP1-like, carboxy-terminal protein | HC | chr5:20281096-20271961 | 20130731
Soybean Glyma01g08050.1 197 47.7 57.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1228820.1 length: 380 aa.
IPR013930 RNA polymerase II-associated protein 1, N-terminal
method AccNumber shortName E-value location
HMMPfam PF08621 RPAP1_N 1.8e-13 266-311
no_ID  
HMMPanther PTHR21483 FAMILY 3.9e-41 31-309
HMMPanther PTHR21483:SF11 SUBFAMILY 3.9e-41 31-309
Seg seg seg NA 82-101
244-256
307-319
365-375
Wolf-PSORT
Lj2g3v1228820.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1228820.1