Miyakogusa Predicted Gene

Lj2g3v1226770.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K7W6_SOYBN 306 79.6 87.4 (tr|K7K7W6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G02310.1 172 51.3 65.6 | Symbols: SEP2, AGL4 | K-box region and MADS-box transcription factor family protein | chr3:464554-466687 REVERSE LENGTH=250
Medicago Medtr5g046830.1 228 72.3 83.9 | MADS-box transcription factor | HC | chr5:20527970-20522988 | 20130731
Soybean Glyma01g08130.1 280 77.6 85.9  
LJGI gnl|LJGI|TC69671 498 99.6 99.6 weakly similar to UniRef100_A7Y7W7 Cluster: MADS-box protein; n=1; Populus deltoides|Rep: MADS-box protein - Populus deltoides (Eastern poplar) (Eastern cottonwood), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1226770.3 length: 240 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 2.1e-26 73-170
ProfileScan PS51297 K_BOX 15.913 84-174
no_ID  
Coil coil coiled-coil NA 118-142
147-171
HMMPanther PTHR11945 MADS 1.5e-44 52-236
HMMPanther PTHR11945:SF19 MADS 1.5e-44 52-236
Wolf-PSORT
Lj2g3v1226770.3	mito 6, nucl 2, vacu 2, cyto 1, plas 1, extr 1, E.R. 1, cysk_nucl 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1226770.3