Miyakogusa Predicted Gene
- Lj2g3v1203450.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T8R8_LOTJA |
92.8 |
95.5 |
97.7 |
(tr|I3T8R8) Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT3G25230.2 |
67.4 |
83.3 |
83.3 |
| Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 | chr3:9188257-9191175 FORWARD LENGTH=562 |
| Medicago |
Medtr7g053470.1 |
68.2 |
83.3 |
88.9 |
| FKBP-type peptidyl-prolyl cis-trans isomerase | HC | chr7:18851017-18844062 | 20130731 |
| Soybean |
Glyma16g10730.2 |
69.7 |
86.1 |
88.9 |
|
| LJGI |
gnl|LJGI|FS327122 |
264 |
100.0 |
100.0 |
similar to UniRef100_Q0WSA8 Cluster: Peptidylprolyl isomerase; n=1; Arabidopsis thaliana|Rep: Peptidylprolyl isomerase - Arabidopsis thaliana (Mouse-ear cress), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1203450.1 |
length: 46 aa. |
| IPR001179 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006457 |
protein folding |
|
|
| HMMPfam |
PF00254 |
FKBP_C |
4.5e-09 |
9-44 |
| ProfileScan |
PS50059 |
FKBP_PPIASE |
12.733 |
11-46 |
| IPR023566 |
Peptidyl-prolyl cis-trans isomerase, FKBP-type |
| HMMPanther |
PTHR10516 |
PEPTIDYL-PROLYL |
7e-18 |
9-44 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.50.40 |
no description |
3.1e-14 |
9-45 |
| HMMPanther |
PTHR10516:SF66 |
PEPTIDYL-PROLYL |
7e-18 |
9-44 |
| superfamily |
SSF54534 |
FKBP-like |
1.5e-09 |
6-45 |
- Wolf-PSORT
Lj2g3v1203450.1 nucl 9, mito 2, cyto 1, plas 1, extr 1, chlo_mito 1, cyto_mito 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1203450.1 |
|