| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | F6HGF2_VITVI | 1345 | 67.0 | 76.2 | (tr|F6HGF2) DNA-directed RNA polymerase OS=Vitis vinifera GN=VIT_01s0010g00690 PE=3 SV=1 |
| TAIR_pep | AT1G68990.1 | 1223 | 59.4 | 71.9 | | Symbols: MGP3 | male gametophyte defective 3 | chr1:25935499-25940755 REVERSE LENGTH=976 |
| Medicago | Medtr8g065900.1 | 1118 | 77.4 | 87.2 | | DNA-directed RNA polymerase-like protein | HC | chr8:27401434-27394114 | 20130731 |
| Soybean | Glyma18g51160.1 | 1184 | 64.6 | 74.6 | |
| LJGI | gnl|LJGI|CB826632 | 367 | 86.2 | 86.2 | similar to UniRef100_A7PAG7 Cluster: DNA-directed RNA polymerase; n=1; Vitis vinifera|Rep: DNA-directed RNA polymerase - Vitis vinifera (Grape), partial (13%) |
| Lj2g3v1203430.1 | length: 990 aa. | |||
| IPR002092 | DNA-directed RNA polymerase, phage-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
| Biological Process | GO:0006351 | transcription, DNA-dependent | ||
| HMMPanther | PTHR10102 | DNA-DIRECTED | 0 | 123-990 |
| HMMPfam | PF00940 | RNA_pol | 6.4e-154 | 599-990 |
| PatternScan | PS00489 | RNA_POL_PHAGE_2 | NA | 760-774 |
| PatternScan | PS00900 | RNA_POL_PHAGE_1 | NA | 687-698 |
| IPR024075 | DNA-directed RNA polymerase, helix hairpin domain | |||
| Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
| Gene3D | G3DSA:1.10.287.260 | no description | 1.6e-29 | 477-559 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 136-164 515-536 |
| Gene3D | G3DSA:1.10.1320.10 | no description | 9.8e-92 | 301-476 |
| Gene3D | G3DSA:1.10.150.20 | no description | 3.2e-68 | 709-897 |
| Gene3D | G3DSA:1.10.287.280 | no description | 1.6e-30 | 599-679 |
| Gene3D | G3DSA:3.30.70.370 | no description | 4.9e-59 | 898-979 |
| Seg | seg | seg | NA | 257-274 294-311 509-521 749-758 |
| superfamily | SSF56672 | DNA/RNA | 6.6e-280 | 108-990 |
Lj2g3v1203430.1 chlo 8, mito 3.5, cyto_mito 2.5, nucl 1, cysk 1, cysk_nucl 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1203430.1 |