Miyakogusa Predicted Gene

Lj2g3v1201300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J4G7_MEDTR 135 57.9 64.5 (tr|G7J4G7) RING-H2 finger protein ATL1N OS=Medicago truncatula GN=MTR_3g099650 PE=2 SV=1
TAIR_pep AT1G72200.1 103 67.6 77.9 | Symbols: | RING/U-box superfamily protein | chr1:27169935-27171149 REVERSE LENGTH=404
Medicago Medtr3g099650.1 135 57.9 64.5 | RING-H2 zinc finger protein, putative | HC | chr3:45686700-45688504 | 20130731
Soybean Glyma06g10460.1 121 77.1 85.7  
LJGI gnl|LJGI|BW619319 454 98.8 98.8 weakly similar to UniRef100_A7NUS9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1201300.1 length: 137 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.2e-11 99-136
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.3e-12 97-136
no_ID  
HMMPanther PTHR22764 RING 1.2e-26 37-137
HMMPanther PTHR22764:SF10 PUTATIVE 1.2e-26 37-137
Seg seg seg NA 7-29
43-53
superfamily SSF57850 RING/U-box 7.7e-13 70-137
Wolf-PSORT
Lj2g3v1201300.1	cyto 8, vacu 3, plas 1, E.R. 1, cysk 1, cysk_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1201300.1