Miyakogusa Predicted Gene
- Lj2g3v1200070.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SHE6_LOTJA |
105 |
67.1 |
82.3 |
(tr|I3SHE6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G17020.1 |
74.7 |
45.8 |
67.5 |
| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358 |
| Medicago |
Medtr0056s0160.1 |
103 |
67.1 |
82.3 |
| flavonol synthase/flavanone 3-hydroxylase | HC | scaffold0056:73978-61897 | 20130731 |
| Soybean |
Glyma02g13850.1 |
99.4 |
66.3 |
77.1 |
|
| LJGI |
gnl|LJGI|TC66175 |
488 |
100.0 |
100.0 |
weakly similar to UniRef100_A7QV95 Cluster: Chromosome undetermined scaffold_186, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_186, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1200070.1 |
length: 84 aa. |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14226 |
DIOX_N |
3.1e-07 |
51-83 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
2.1e-15 |
10-83 |
| no_ID |
|
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
1.2e-18 |
13-83 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
1.2e-18 |
13-83 |
| superfamily |
SSF51197 |
Clavaminate |
1.9e-11 |
8-83 |
- Wolf-PSORT
Lj2g3v1200070.1 chlo 7, nucl 2, E.R. 2, cyto 1, mito 1, vacu 1, cysk_nucl 1, nucl_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1200070.1 |
|