Miyakogusa Predicted Gene
- Lj2g3v1196390.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SVS3_LOTJA |
609 |
99.7 |
100.0 |
(tr|I3SVS3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G13480.1 |
221 |
46.5 |
61.7 |
| Symbols: | Protein of unknown function (DUF1262) | chr1:4622783-4624043 REVERSE LENGTH=387 |
| Medicago |
Medtr6g472110.1 |
492 |
80.9 |
90.4 |
| DUF1262 family protein | HC | chr6:25936643-25938793 | 20130731 |
| Soybean |
Glyma02g14260.1 |
491 |
84.6 |
92.8 |
|
| LJGI |
gnl|LJGI|TC68015 |
1737 |
100.0 |
100.0 |
weakly similar to UniRef100_A7P2Y2 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1196390.1 |
length: 292 aa. |
| IPR010683 |
Protein of unknown function DUF1262 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06880 |
DUF1262 |
7.2e-32 |
23-123 |
| no_ID |
|
| HMMPanther |
PTHR31050 |
FAMILY |
5.5e-105 |
2-292 |
- Wolf-PSORT
Lj2g3v1196390.1 nucl 9, plas 1.5, golg_plas 1.5, chlo 1, mito 1, cysk 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1196390.1 |
|