Miyakogusa Predicted Gene

Lj2g3v1172460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP31_LOTJA 441 79.4 79.4 (tr|C0JP31) Putative basic helix-loop-helix protein BHLH25 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT1G68810.1 238 62.5 70.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:25861289-25862882 FORWARD LENGTH=368
Medicago Medtr1g093750.1 254 52.8 58.9 | basic helix loop helix (BHLH) DNA-binding family protein | HC | chr1:42063379-42060309 | 20130731
Soybean Glyma20g32660.1 294 58.8 64.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1172460.1 length: 302 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 4.5e-14 153-207
HMMPfam PF00010 HLH 7.3e-12 152-198
HMMSmart SM00353 helix 4.6e-13 155-204
ProfileScan PS50888 BHLH 17.136 149-198
superfamily SSF47459 HLH, 2.3e-13 149-203
no_ID  
HMMPanther PTHR12565 STEROL 1.3e-27 12-248
Seg seg seg NA 24-37
73-84
149-164
247-261
278-299
Wolf-PSORT
Lj2g3v1172460.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1172460.1