| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JYA5_MEDTR | 433 | 81.7 | 86.9 | (tr|G7JYA5) Zinc finger-like protein OS=Medicago truncatula GN=MTR_5g054090 PE=4 SV=1 |
| TAIR_pep | AT1G13290.1 | 345 | 71.8 | 80.0 | | Symbols: DOT5, WIP6 | C2H2-like zinc finger protein | chr1:4550366-4551527 REVERSE LENGTH=302 |
| Medicago | Medtr1g093095.1 | 332 | 68.1 | 75.3 | | C2H2-type zinc finger protein | HC | chr1:41939075-41940250 | 20130731 |
| Soybean | Glyma02g10970.1 | 374 | 82.7 | 86.7 | |
| LJGI | gnl|LJGI|FS360083 | 69.9 | 85.5 | 85.5 | homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined scaffold_87, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_87, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%) |
| Lj2g3v1168860.1 | length: 304 aa. | |||
| IPR007087 | Zinc finger, C2H2 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0008270 | zinc ion binding | ||
| PatternScan | PS00028 | ZINC_FINGER_C2H2_1 | NA | 123-143 |
| ProfileScan | PS50157 | ZINC_FINGER_C2H2_2 | 10.055 | 121-148 |
| IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Gene3D | G3DSA:3.30.160.60 | no description | 0.0006 | 121-140 192-226 |
| IPR015880 | Zinc finger, C2H2-like | |||
| HMMSmart | SM00355 | zinc | 1.4e+02 | 121-143 169-201 206-226 |
| no_ID | ||||
| HMMPanther | PTHR11389 | ZINC | 9.5e-65 | 52-268 |
| HMMPanther | PTHR11389:SF379AZ2-RELATED | T[52-268] | 9.5e-65 | |
| HMMPfam | PF13894 | zf-C2H2_4 | 0.059 | 121-140 208-228 |
| Seg | seg | seg | NA | 269-295 |
| superfamily | SSF57667 | C2H2 | 0.00014 | 188-226 103-147 |
Lj2g3v1168860.1 nucl 12.5, cyto_nucl 7
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1168860.1 |