| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1KWV7_SOYBN | 566 | 72.5 | 76.0 | (tr|I1KWV7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G02540.1 | 382 | 76.1 | 82.5 | | Symbols: RAD23-3, RAD23C | Rad23 UV excision repair protein family | chr3:533095-536151 REVERSE LENGTH=419 |
| Medicago | Medtr1g111090.1 | 509 | 68.0 | 73.0 | | RAD23 UV excision repair family protein | HC | chr1:50171474-50175986 | 20130731 |
| Soybean | Glyma08g32090.3 | 566 | 72.5 | 76.0 | |
| LJGI | gnl|LJGI|TC66052 | 2361 | 100.0 | 100.0 | similar to UniRef100_A7P372 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%) |
| Lj2g3v1155470.1 | length: 397 aa. | |||
| IPR000449 | Ubiquitin-associated/translation elongation factor EF1B, N-terminal | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00627 | UBA | 2.7e-09 | 169-207 355-389 |
| IPR000626 | Ubiquitin | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00240 | ubiquitin | 7.8e-21 | 6-77 |
| HMMSmart | SM00213 | Ubiquitin | 1e-23 | 1-75 |
| IPR004806 | UV excision repair protein Rad23 | |||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006289 | nucleotide-excision repair | ||
| FPrintScan | PR01839 | RAD23PROTEIN | 2e-33 | 298-320 348-364 365-379 380-395 |
| HMMTigr | TIGR00601 | rad23: | 5.1e-117 | 1-397 |
| IPR006636 | Heat shock chaperonin-binding | |||
| HMMSmart | SM00727 | Heat | 5.2e-05 | 270-313 |
| IPR009060 | UBA-like | |||
| Molecular Function | GO:0005515 | protein binding | ||
| superfamily | SSF46934 | UBA-like | 6.9e-13 | 326-397 166-230 |
| IPR015360 | XPC-binding domain | |||
| Molecular Function | GO:0003684 | damaged DNA binding | ||
| Biological Process | GO:0006289 | nucleotide-excision repair | ||
| Biological Process | GO:0043161 | proteasomal ubiquitin-dependent protein catabolic process | ||
| Gene3D | G3DSA:1.10.10.540 | no description | 1e-28 | 268-334 |
| HMMPfam | PF09280 | XPC-binding | 2.5e-21 | 272-329 |
| superfamily | SSF101238 | XPC-binding | 3.6e-20 | 267-338 |
| IPR015940 | Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote | |||
| HMMSmart | SM00165 | Ubiquitin | 1.7e-08 | 169-209 354-391 |
| ProfileScan | PS50030 | UBA | 14.547 | 167-210 351-392 |
| IPR019955 | Ubiquitin supergroup | |||
| ProfileScan | PS50053 | UBIQUITIN_2 | 20.283 | 1-79 |
| no_ID | ||||
| Gene3D | G3DSA:1.10.8.10 | no description | 7.6e-25 | 162-213 351-396 |
| Gene3D | G3DSA:3.10.20.90 | no description | 1.1e-22 | 1-78 |
| HMMPanther | PTHR10621 | UV | 1.2e-163 | 2-397 |
| Seg | seg | seg | NA | 75-89 95-117 121-143 224-243 |
| superfamily | SSF54236 | Ubiquitin-like | 6.8e-24 | 1-79 |
Lj2g3v1155470.1 cyto 5, chlo 3, mito 3, chlo_mito 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1155470.1 | Not targeted | -63.107 | -4.100 | -7.061 | 91.59% | -51.945 |