Miyakogusa Predicted Gene
- Lj2g3v1155320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9HJ23_POPTR |
550 |
83.2 |
87.9 |
(tr|B9HJ23) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564524 PE=2 SV=1 |
| TAIR_pep |
AT1G68560.1 |
499 |
73.7 |
83.8 |
| Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 | chr1:25734435-25737897 REVERSE LENGTH=915 |
| Medicago |
Medtr5g057990.1 |
548 |
82.5 |
88.9 |
| alpha-glucosidase | HC | chr5:23929835-23935782 | 20130731 |
| Soybean |
Glyma08g31890.1 |
544 |
82.5 |
89.5 |
|
| LJGI |
gnl|LJGI|TC76690 |
1041 |
94.1 |
94.1 |
similar to UniRef100_A7P375 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1155320.1 |
length: 310 aa. |
| IPR000322 |
Glycoside hydrolase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR22762 |
ALPHA-GLUCOSIDASE |
2.4e-142 |
1-310 |
| HMMPfam |
PF01055 |
Glyco_hydro_31 |
1.1e-70 |
22-310 |
| PatternScan |
PS00129 |
GLYCOSYL_HYDROL_F31_1 |
NA |
189-196 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
6.2e-42 |
31-310 |
| no_ID |
|
| HMMPanther |
PTHR22762:SF9 |
ALPHA-GLUCOSIDASE |
2.4e-142 |
1-310 |
- Wolf-PSORT
Lj2g3v1155320.1 nucl 7, chlo 3, cyto 2, extr 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1155320.1 |
|