Miyakogusa Predicted Gene

Lj2g3v1105370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SPW4_MEDTR 400 81.6 84.8 (tr|I3SPW4) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT3G02310.1 315 64.8 74.3 | Symbols: SEP2, AGL4 | K-box region and MADS-box transcription factor family protein | chr3:464554-466687 REVERSE LENGTH=250
Medicago Medtr6g015975.1 404 82.4 85.2 | MADS-box transcription factor | HC | chr6:5652656-5658093 | 20130731
Soybean Glyma13g06730.2 394 79.4 84.3  
LJGI gnl|LJGI|TC63015 930 99.6 99.6 similar to UniRef100_Q3Y4G8 Cluster: MADS-box protein; n=1; Glycine max|Rep: MADS-box protein - Glycine max (Soybean), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1105370.1 length: 219 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 6.8e-33 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 2.5e-29 9-59
HMMSmart SM00432 no description 1.3e-41 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 33.515 1-61
superfamily SSF55455 SRF-like 1.5e-30 2-98
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 9.7e-28 60-145
ProfileScan PS51297 K_BOX 15.206 59-149
no_ID  
Coil coil coiled-coil NA 96-117
HMMPanther PTHR11945 MADS 2.4e-94 1-217
HMMPanther PTHR11945:SF19 MADS 2.4e-94 1-217
Wolf-PSORT
Lj2g3v1105370.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1105370.1