Miyakogusa Predicted Gene
- Lj2g3v1080750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M1I2_SOYBN |
185 |
50.5 |
67.8 |
(tr|I1M1I2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G05460.1 |
139 |
44.0 |
60.5 |
| Symbols: | RNI-like superfamily protein | chr4:2761106-2762400 REVERSE LENGTH=302 |
| Medicago |
Medtr3g067630.1 |
205 |
58.3 |
69.8 |
| F-box/LRR protein | LC | chr3:30230228-30231330 | 20130731 |
| Soybean |
Glyma13g29200.1 |
185 |
50.5 |
67.8 |
|
| LJGI |
gnl|LJGI|TC80874 |
133 |
78.8 |
78.8 |
weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1; Medicago truncatula|Rep: N7 protein - Medicago truncatula (Barrel medic), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1080750.1 |
length: 204 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.2e-19 |
2-197 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
1e-42 |
1-199 |
| HMMPanther |
PTHR23125:SF23 |
N7-RELATED |
1e-42 |
1-199 |
| superfamily |
SSF52047 |
RNI-like |
1e-12 |
23-196 |
- Wolf-PSORT
Lj2g3v1080750.1 chlo 6, mito 4, cyto 2, cyto_mito 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1080750.1 |
|