Miyakogusa Predicted Gene

Lj2g3v1069200.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LWP5_SOYBN 1426 87.3 91.3 (tr|I1LWP5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G15400.1 1239 75.8 85.2 | Symbols: | U-box domain-containing protein | chr5:4997764-5002907 REVERSE LENGTH=1038
Medicago Medtr6g013690.1 1379 84.5 89.7 | ubiquitin conjugation factor E4, putative | HC | chr6:4310064-4300709 | 20130731
Soybean Glyma13g05850.1 1426 87.3 91.3  
LJGI gnl|LJGI|TC58656 2514 99.8 99.8 homologue to UniRef100_A7PN20 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1069200.4 length: 793 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 1.1e-29 693-764
HMMSmart SM00504 Modified 1.4e-22 696-759
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.7e-19 694-754
IPR019474 Ubiquitin conjugation factor E4, core
Cellular Component GO:0000151 ubiquitin ligase complex    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Biological Process GO:0016567 protein ubiquitination    
Molecular Function GO:0034450 ubiquitin-ubiquitin ligase activity    
HMMPfam PF10408 Ufd2P_core 3.7e-194 12-676
no_ID  
Coil coil coiled-coil NA 271-299
HMMPanther PTHR13931 UBIQUITINATION 0 2-783
HMMPanther PTHR13931:SF2 UBIQUITINATION 0 2-783
Seg seg seg NA 63-78
190-208
superfamily SSF57850 RING/U-box 1.4e-23 675-769
Wolf-PSORT
Lj2g3v1069200.4	nucl 4, chlo 2, extr 2, vacu 2, E.R. 2, cyto_nucl 2, cysk_nucl 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1069200.4