Miyakogusa Predicted Gene

Lj2g3v1068720.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MW51_SOYBN 785 80.4 85.9 (tr|K7MW51) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G01100.1 552 57.0 74.5 | Symbols: HYP1, ATHYP1 | hypothetical protein 1 | chr3:35013-38176 REVERSE LENGTH=703

Medicago Medtr6g012870.1 764 78.5 85.9 | ERD (early-responsive to dehydration stress) family protein | HC | chr6:4003284-4010065 | 20130731

Soybean Glyma19g03110.1 714 74.7 80.2

LJGI gnl|LJGI|GO023315 1346 99.7 99.7 similar to UniRef100_A7PN04 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1068720.1 length: 475 aa.

IPR003864 Domain of unknown function DUF221

method AccNumber shortName E-value location

Cellular Component GO:0016020 membrane

HMMPfam PF02714 DUF221 3.5e-90 69-386

no_ID

HMMPanther PTHR13018 PROBABLE 7.7e-139 28-469

Seg seg seg NA 323-340
385-408

Wolf-PSORT

Lj2g3v1068720.1 plas 11, nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1068720.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MW51_SOYBN	785	80.4	85.9	(tr\|K7MW51) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G01100.1	552	57.0	74.5	\| Symbols: HYP1, ATHYP1 \| hypothetical protein 1 \| chr3:35013-38176 REVERSE LENGTH=703
Medicago	Medtr6g012870.1	764	78.5	85.9	\| ERD (early-responsive to dehydration stress) family protein \| HC \| chr6:4003284-4010065 \| 20130731
Soybean	Glyma19g03110.1	714	74.7	80.2
LJGI	gnl\|LJGI\|GO023315	1346	99.7	99.7	similar to UniRef100_A7PN04 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)

IPR003864	Domain of unknown function DUF221
Lj2g3v1068720.1				length: 475 aa.
method	AccNumber	shortName	E-value	location
Cellular Component	GO:0016020	membrane
HMMPfam	PF02714	DUF221	3.5e-90	69-386
no_ID
HMMPanther	PTHR13018	PROBABLE	7.7e-139	28-469
Seg	seg	seg	NA	323-340 385-408