Miyakogusa Predicted Gene

Lj2g3v1055960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LWJ6_SOYBN 2293 90.7 92.7 (tr|I1LWJ6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G28860.1 2152 84.7 90.3 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ATP binding cassette subfamily B19 | chr3:10870287-10877286 REVERSE LENGTH=1252
Medicago Medtr6g011680.1 2299 89.9 92.9 | ABC transporter B family protein | HC | chr6:3435580-3425886 | 20130731
Soybean Glyma13g05300.1 2293 90.7 92.7  
LJGI gnl|LJGI|BP039737 1003 99.8 99.8 homologue to UniRef100_A7PMS6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1055960.1 length: 1252 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 6.8e-46 48-317
688-962
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.6e-21 407-532
1052-1177
ProfileScan PS50893 ABC_TRANSPORTER_2 24.630 365-601
1012-1246
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.1e-12 392-584
1037-1223
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 3.3e-55 14-516
663-1167
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 504-518
1149-1163
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 40.747 44-330
688-975
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1e-67 365-587
1010-1232
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 7.5e-47 28-350
675-989
Gene3D G3DSA:3.40.50.300 no description 4e-80 365-595
1010-1241
HMMPanther PTHR24221 FAMILY 0 31-1249
HMMPanther PTHR24221:SF24 SUBFAMILY 0 31-1249
Seg seg seg NA 392-411
614-643
1111-1127
Wolf-PSORT
Lj2g3v1055960.1	plas 10, E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1055960.1