Miyakogusa Predicted Gene

Lj2g3v1034670.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LXG7_SOYBN 628 69.0 76.3 (tr|K7LXG7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G25150.1 57.0 36.9 50.5 | Symbols: TAF5 | TBP-associated factor 5 | chr5:8677117-8682058 FORWARD LENGTH=669
Medicago Medtr6g011500.1 444 65.2 73.7 | WD domain, G-beta repeat protein | HC | chr6:3285166-3281035 | 20130731
Soybean Glyma13g05220.1 488 73.5 78.7  
LJGI gnl|LJGI|TC66472 1612 100.0 100.0 similar to UniRef100_A7PMN9 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1034670.2 length: 523 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 3.9e-05 149-196
199-241
254-290
HMMSmart SM00320 WD40 1.4 145-197
198-241
250-290
337-375
384-420
ProfileScan PS50082 WD_REPEATS_2 11.945 205-242
257-299
IPR001810 F-box domain, cyclin-like
Molecular Function GO:0005515 protein binding    
superfamily SSF81383 F-box 2.6e-11 9-210
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.2e-38 124-472
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 16.296 205-299
superfamily SSF50978 WD40 5.1e-36 143-470
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 277-291
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 5e-06 184-198
228-242
277-291
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 6.2e-10 19-102
HMMPanther PTHR22844 F-BOX 1.9e-28 32-473
Seg seg seg NA 4-14
292-300
491-522
Wolf-PSORT
Lj2g3v1034670.2	nucl 10, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1034670.2