Miyakogusa Predicted Gene

Lj2g3v1022560.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1N603_SOYBN 340 67.0 77.0 (tr|I1N603) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G74860.1 127 60.2 77.8 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19010.1); Has 210 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 9; Metazoa - 75; Fungi - 18; Plants - 58; Viruses - 1; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:28123432-28125600 FORWARD LENGTH=400

Medicago Medtr4g107200.1 169 48.2 63.1 | hypothetical protein | HC | chr4:44270581-44265275 | 20130731

Soybean Glyma19g02020.1 340 67.0 77.0

LJGI gnl|LJGI|TC60634 1158 95.2 95.2 similar to UniRef100_A7PMI9 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1022560.2 length: 264 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 23-44
66-108

Wolf-PSORT

Lj2g3v1022560.2 mito 5, cyto 4, nucl 2.5, cyto_mito 2.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1022560.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1N603_SOYBN	340	67.0	77.0	(tr\|I1N603) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G74860.1	127	60.2	77.8	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19010.1); Has 210 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 9; Metazoa - 75; Fungi - 18; Plants - 58; Viruses - 1; Other Eukaryotes - 49 (source: NCBI BLink). \| chr1:28123432-28125600 FORWARD LENGTH=400
Medicago	Medtr4g107200.1	169	48.2	63.1	\| hypothetical protein \| HC \| chr4:44270581-44265275 \| 20130731
Soybean	Glyma19g02020.1	340	67.0	77.0
LJGI	gnl\|LJGI\|TC60634	1158	95.2	95.2	similar to UniRef100_A7PMI9 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)

no_ID
Lj2g3v1022560.2				length: 264 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	23-44 66-108