Miyakogusa Predicted Gene
- Lj2g3v1022350.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N5Z6_SOYBN |
218 |
89.5 |
93.9 |
(tr|I1N5Z6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G15020.2 |
170 |
68.3 |
82.5 |
| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355 |
| Medicago |
Medtr6g008970.1 |
199 |
83.3 |
91.2 |
| paired amphipathic helix SIN3-like protein | HC | chr6:2536170-2526712 | 20130731 |
| Soybean |
Glyma19g01920.1 |
218 |
89.5 |
93.9 |
|
| LJGI |
gnl|LJGI|TC79665 |
561 |
98.4 |
98.4 |
similar to UniRef100_A7PMK0 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1022350.2 |
length: 136 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12346 |
SIN3B-RELATED |
7.6e-40 |
33-136 |
| Seg |
seg |
seg |
NA |
1-15 |
- Wolf-PSORT
Lj2g3v1022350.2 chlo 5, nucl 4, mito 2, vacu 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1022350.2 |
|