Miyakogusa Predicted Gene
- Lj2g3v1014470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N5U1_SOYBN |
183 |
85.7 |
95.2 |
(tr|I1N5U1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G05780.1 |
139 |
61.8 |
79.4 |
| Symbols: | Vacuolar ATPase assembly integral membrane protein VMA21-like domain | chr1:1726761-1728180 FORWARD LENGTH=106 |
| Medicago |
Medtr6g017185.6 |
184 |
82.7 |
94.2 |
| VMA21-like domain protein | HC | chr6:6808973-6810568 | 20130731 |
| Soybean |
Glyma19g01350.3 |
183 |
85.7 |
95.2 |
|
| LJGI |
gnl|LJGI|TC66439 |
624 |
100.0 |
100.0 |
similar to UniRef100_A7P2M9 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1014470.1 |
length: 104 aa. |
| IPR019013 |
Vacuolar ATPase assembly integral membrane protein VMA21-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09446 |
VMA21 |
1.6e-15 |
2-65 |
- Wolf-PSORT
Lj2g3v1014470.1 mito 5, extr 3, chlo 2, plas 2, cyto 1, E.R. 1, nucl_plas 1, golg_plas 1, cysk_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1014470.1 |
|