database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1M022_SOYBN | 3075 | 71.8 | 78.7 | (tr|I1M022) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
TAIR_pep | AT3G01460.1 | 1592 | 44.0 | 59.3 | | Symbols: MBD9, ATMBD9 | methyl-CPG-binding domain 9 | chr3:173316-182038 FORWARD LENGTH=2176 |
Medicago | Medtr6g007650.1 | 2891 | 68.4 | 77.1 | | methyl-CpG-binding domain protein | HC | chr6:1748720-1735614 | 20130731 |
Soybean | Glyma13g23910.1 | 2925 | 70.0 | 76.9 | |
LJGI | gnl|LJGI|TC79833 | 2058 | 99.9 | 99.9 | similar to UniRef100_A7PMB8 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
Lj2g3v1014400.1 | length: 2231 aa. | |||
IPR001487 | Bromodomain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:1.20.920.10 | no description | 5.4e-11 | 1135-1244 |
HMMPfam | PF00439 | Bromodomain | 4.4e-05 | 1178-1233 |
ProfileScan | PS50014 | BROMODOMAIN_2 | 9.049 | 1180-1228 |
superfamily | SSF47370 | Bromodomain | 8.7e-11 | 1121-1244 |
IPR001739 | Methyl-CpG DNA binding | |||
Molecular Function | GO:0003677 | DNA binding | ||
Cellular Component | GO:0005634 | nucleus | ||
HMMPfam | PF01429 | MBD | 1e-10 | 264-317 |
ProfileScan | PS50982 | MBD | 9.627 | 263-330 |
IPR001965 | Zinc finger, PHD-type | |||
Molecular Function | GO:0005515 | protein binding | ||
Molecular Function | GO:0008270 | zinc ion binding | ||
HMMSmart | SM00249 | PHD | 9.2e-14 | 85-134 1289-1335 |
IPR003888 | FY-rich, N-terminal | |||
Cellular Component | GO:0005634 | nucleus | ||
HMMPfam | PF05964 | FYRN | 4.6e-05 | 412-458 |
ProfileScan | PS51542 | FYRN | 18.705 | 406-459 |
IPR011011 | Zinc finger, FYVE/PHD-type | |||
superfamily | SSF57903 | FYVE/PHD | 1.2e-12 | 1272-1353 49-134 |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
Gene3D | G3DSA:3.30.40.10 | no description | 2.4e-17 | 86-139 1289-1339 |
IPR019786 | Zinc finger, PHD-type, conserved site | |||
PatternScan | PS01359 | ZF_PHD_1 | NA | 86-133 1290-1334 |
IPR019787 | Zinc finger, PHD-finger | |||
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF00628 | PHD | 3.1e-12 | 86-134 1289-1335 |
ProfileScan | PS50016 | ZF_PHD_2 | 10.202 | 83-136 1287-1337 |
no_ID | ||||
HMMPanther | PTHR10615 | HISTONE | 1.5e-35 | 904-1409 |
HMMPanther | PTHR10615:SF70 | MBD9 | 1.5e-35 | 904-1409 |
Seg | seg | seg | NA | 10-37 69-80 89-103 704-714 907-918 975-988 1022-1033 1124-1137 1970-1988 2215-2227 |
Lj2g3v1014400.1 nucl 10, cyto 2, vacu 1, E.R. 1, E.R._vacu 1, cyto_pero 1, cyto_plas 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj2g3v1014400.1 |