Miyakogusa Predicted Gene
- Lj2g3v0982510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N5P4_SOYBN |
551 |
74.3 |
82.9 |
(tr|I1N5P4) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G14700.1 |
358 |
50.3 |
68.5 |
| Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr5:4740502-4743327 REVERSE LENGTH=368 |
| Medicago |
Medtr6g406250.1 |
520 |
72.3 |
80.7 |
| cinnamoyl-CoA reductase | HC | chr6:1062868-1055996 | 20130731 |
| Soybean |
Glyma19g00980.1 |
551 |
74.3 |
82.9 |
|
| LJGI |
gnl|LJGI|TC57820 |
1302 |
100.0 |
100.0 |
similar to UniRef100_Q8LDZ7 Cluster: Cinnamoyl CoA reductase-like protein; n=1; Arabidopsis thaliana|Rep: Cinnamoyl CoA reductase-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0982510.1 |
length: 355 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
1.5e-14 |
54-254 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
7.5e-31 |
53-342 |
| no_ID |
|
| HMMPanther |
PTHR10366 |
NAD |
3.4e-82 |
45-341 |
| HMMPanther |
PTHR10366:SF9 |
CINNAMOYL-COA |
3.4e-82 |
45-341 |
| Seg |
seg |
seg |
NA |
61-72 |
| superfamily |
SSF51735 |
NAD(P)-binding |
8.5e-35 |
50-343 |
- Wolf-PSORT
Lj2g3v0982510.1 chlo 7, nucl 2, mito 2, plas 1, extr 1, E.R. 1, cyto_nucl 1, cyto_mito 1, cysk_nucl 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0982510.1 |
|