Miyakogusa Predicted Gene

Lj2g3v0934150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K1K0_SOYBN 288 62.9 76.5 (tr|I1K1K0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G27640.1 215 50.7 65.8 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:10232307-10235467 FORWARD LENGTH=535
Medicago Medtr6g005220.1 273 63.0 74.0 | denticleless-like protein | HC | chr6:664598-660140 | 20130731
Soybean Glyma19g00350.1 283 65.6 78.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0934150.1 length: 257 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 1.9e-10 144-174
179-217
HMMSmart SM00320 WD40 2.1e-09 135-174
177-217
ProfileScan PS50082 WD_REPEATS_2 14.953 142-183
184-226
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 6.4e-26 100-238
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 22.649 142-226
superfamily SSF50978 WD40 3.9e-24 92-238
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 161-175
no_ID  
HMMPanther PTHR22852 LETHAL(2)DENTICLELESS 3.2e-48 28-254
Seg seg seg NA 22-33
Wolf-PSORT
Lj2g3v0934150.1	chlo 10, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0934150.1