Miyakogusa Predicted Gene

Lj2g3v0918390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N5M3_SOYBN 513 73.9 84.2 (tr|I1N5M3) Elongation factor Ts, mitochondrial OS=Glycine max GN=EFTS PE=3 SV=1
TAIR_pep AT4G11120.1 468 67.7 82.1 | Symbols: | translation elongation factor Ts (EF-Ts), putative | chr4:6778066-6779934 FORWARD LENGTH=395
Medicago Medtr6g003970.1 527 74.9 83.3 | elongation factor Ts protein | HC | chr6:44222-38080 | 20130731
Soybean Glyma19g00800.1 513 73.9 84.2  
LJGI gnl|LJGI|TC58032 1386 100.0 100.0 similar to UniRef100_Q9SWW0 Cluster: Ethylene-responsive elongation factor EF-Ts precursor; n=1; Solanum lycopersicum|Rep: Ethylene-responsive elongation factor EF-Ts precursor - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0918390.1 length: 353 aa.
IPR001816 Translation elongation factor EFTs/EF1B
method AccNumber shortName E-value location
Molecular Function GO:0003746 translation elongation factor activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006414 translational elongation    
HAMAP MF_00050 EF_Ts 45.843 35-353
HMMPanther PTHR11741 ELONGATION 7.4e-107 34-352
HMMTigr TIGR00116 tsf: 3.8e-67 35-351
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 5.8e-13 31-84
IPR014039 Translation elongation factor EFTs/EF1B, dimerisation
Molecular Function GO:0003746 translation elongation factor activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006414 translational elongation    
Gene3D G3DSA:3.30.479.20 no description 3.9e-29 295-338
HMMPfam PF00889 EF_TS 1.3e-56 86-336
superfamily SSF54713 Elongation 4.2e-19 86-336
83-192
IPR018101 Translation elongation factor Ts, conserved site
Molecular Function GO:0003746 translation elongation factor activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006414 translational elongation    
PatternScan PS01127 EF_TS_2 NA 104-114
no_ID  
Coil coil coiled-coil NA 49-70
Gene3D G3DSA:1.10.286.20 no description 5.5e-17 251-294
Gene3D G3DSA:1.10.8.10 no description 8.4e-19 34-84
HMMPanther PTHR11741:SF0 SUBFAMILY 7.4e-107 34-352
Seg seg seg NA 121-132
Wolf-PSORT
Lj2g3v0918390.1	chlo 7, mito 5, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0918390.1