Miyakogusa Predicted Gene
- Lj2g3v0918380.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9N7N9_POPTR |
342 |
95.2 |
98.2 |
(tr|B9N7N9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_584639 PE=4 SV=1 |
| TAIR_pep |
AT1G36730.1 |
307 |
88.6 |
95.8 |
| Symbols: | Translation initiation factor IF2/IF5 | chr1:13898706-13900025 REVERSE LENGTH=439 |
| Medicago |
Medtr7g082940.1 |
339 |
93.4 |
98.2 |
| eukaryotic translation initiation factor 5 | HC | chr7:31827109-31830205 | 20130731 |
| Soybean |
Glyma18g52940.1 |
338 |
93.4 |
97.6 |
|
| LJGI |
gnl|LJGI|FS337618 |
640 |
100.0 |
100.0 |
homologue to UniRef100_P48724 Cluster: Eukaryotic translation initiation factor 5; n=1; Phaseolus vulgaris|Rep: Eukaryotic translation initiation factor 5 - Phaseolus vulgaris (Kidney bean) (French bean), partial (24%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0918380.1 |
length: 182 aa. |
| IPR002735 |
Translation initiation factor IF2/IF5 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| Biological Process |
GO:0006413 |
translational initiation |
|
|
| HMMPfam |
PF01873 |
eIF-5_eIF-2B |
1e-42 |
4-129 |
| HMMSmart |
SM00653 |
domain |
1.9e-62 |
15-129 |
| IPR016189 |
Translation initiation factor IF2/IF5, N-terminal |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| Biological Process |
GO:0006413 |
translational initiation |
|
|
| Gene3D |
G3DSA:3.30.30.50 |
no description |
1.2e-10 |
30-73 |
| superfamily |
SSF100966 |
Translation |
2.1e-24 |
10-101 |
| IPR016190 |
Translation initiation factor IF2/IF5, zinc-binding |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| Biological Process |
GO:0006413 |
translational initiation |
|
|
| superfamily |
SSF75689 |
Zinc-binding |
4.7e-07 |
98-135 |
| no_ID |
|
| HMMPanther |
PTHR23001 |
EUKARYOTIC |
1.1e-102 |
1-182 |
| HMMPanther |
PTHR23001:SF1 |
EUKARYOTIC |
1.1e-102 |
1-182 |
| Seg |
seg |
seg |
NA |
167-182 |
- Wolf-PSORT
Lj2g3v0918380.1 mito 10, cyto 2, chlo 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0918380.1 |
|