Miyakogusa Predicted Gene

Lj2g3v0911660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7K128_SOYBN 669 72.1 79.6 (tr|K7K128) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G15690.1 415 51.2 68.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:6831855-6833594 REVERSE LENGTH=579
Medicago Medtr6g091880.1 602 68.0 77.7 | PPR containing plant-like protein | HC | chr6:34616147-34614592 | 20130731
Soybean Glyma07g15440.1 655 70.6 78.7  
LJGI gnl|LJGI|TC61001 1388 98.9 98.9 weakly similar to UniRef100_A7PEA5 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0911660.1 length: 470 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.39 162-188
191-220
265-285
HMMPfam PF13812 PPR_3 0.06 225-257
HMMTigr TIGR00756 PPR: 6e-07 191-223
ProfileScan PS51375 PPR 6.149 188-222
157-187
122-156
223-257
258-288
no_ID  
HMMPanther PTHR24015 FAMILY 5.2e-151 101-470
HMMPanther PTHR24015:SF0 SUBFAMILY 5.2e-151 101-470
HMMPfam PF14432 DYW_deaminase 3.1e-17 369-460
Seg seg seg NA 228-242
Wolf-PSORT
Lj2g3v0911660.1	chlo 12, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0911660.1