Miyakogusa Predicted Gene

Lj2g3v0892280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6ZS06_SOYBN 587 70.5 78.2 (tr|C6ZS06) Leucine-rich repeat family protein / extensin family protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G29240.1 460 65.2 79.4 | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:14418826-14420073 FORWARD LENGTH=415
Medicago Medtr6g090080.1 575 69.9 79.3 | LRR/extensin | HC | chr6:34202194-34200707 | 20130731
Soybean Glyma01g00890.1 571 70.1 78.5  
LJGI gnl|LJGI|TC78995 2135 99.6 99.6 similar to UniRef100_A7PEE8 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0892280.1 length: 420 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.092 167-184
191-212
ProfileScan PS51450 LRR 5.794 167-188
191-213
214-236
310-332
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 6.6e-07 76-111
no_ID  
FPrintScan PR00019 LEURICHRPT 1.1e-05 168-181
308-321
Gene3D G3DSA:3.80.10.10 no description 4.2e-67 74-355
HMMPanther PTHR26393 FAMILY 6.1e-182 73-407
HMMPanther PTHR26393:SF18 SUBFAMILY 6.1e-182 73-407
Seg seg seg NA 24-56
138-151
superfamily SSF52058 L 5e-56 69-378
Wolf-PSORT
Lj2g3v0892280.1	extr 4, chlo 3, vacu 3, nucl 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0892280.1