Miyakogusa Predicted Gene
- Lj2g3v0890210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q1WAK0_MEDSA |
194 |
82.9 |
90.1 |
(tr|Q1WAK0) Beta-1,3-glucanase OS=Medicago sativa PE=3 SV=1 |
| TAIR_pep |
AT5G56590.1 |
152 |
70.0 |
80.9 |
| Symbols: | O-Glycosyl hydrolases family 17 protein | chr5:22907521-22909436 FORWARD LENGTH=506 |
| Medicago |
Medtr6g088885.1 |
196 |
82.9 |
91.0 |
| glucan endo-1,3-beta-glucosidase-like protein | HC | chr6:34072681-34076407 | 20130731 |
| Soybean |
Glyma08g03670.1 |
187 |
80.0 |
90.9 |
|
| LJGI |
gnl|LJGI|DC596631 |
632 |
100.0 |
100.0 |
similar to UniRef100_Q1WAK0 Cluster: Beta-1,3-glucanase; n=1; Medicago sativa|Rep: Beta-1,3-glucanase - Medicago sativa (Alfalfa), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v0890210.1 |
length: 110 aa. |
| IPR000490 |
Glycoside hydrolase, family 17 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00332 |
Glyco_hydro_17 |
7.2e-22 |
26-109 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
3.6e-24 |
26-110 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
2.7e-18 |
26-110 |
| no_ID |
|
| HMMPanther |
PTHR32227 |
FAMILY |
1.7e-60 |
1-110 |
| HMMPanther |
PTHR32227:SF2 |
SUBFAMILY |
1.7e-60 |
1-110 |
- Wolf-PSORT
Lj2g3v0890210.1 extr 7, chlo 2, vacu 2, nucl 1, E.R. 1, golg 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v0890210.1 |
|